BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H04LP1|AL428622
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1304 1769 0.0
>3x_Contig1304
Length = 6732
Score = 1769 bits (889), Expect = 0.0
Identities = 900/905 (99%), Gaps = 1/905 (0%)
Strand = Plus / Plus
Query: 1 atcatgacatcgatgaatcattgaccactctttacccagaactttacaaagaactaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 atcatgacatcgatgaatcattgaccactctttacccagaactttacaaagaactaactc 1643
Query: 61 taggtaaatccctttcttttaagacattttttgtctgggttgctctttctgtgtttcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 taggtaaatccctttcttttaagacattttttgtctgggttgctctttctgtgtttcaag 1703
Query: 121 gatgcgttatacaaatggcatcccaattctttactagtttaaatgattccgattttacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 gatgcgttatacaaatggcatcccaattctttactagtttaaatgattccgattttacga 1763
Query: 181 aaatggtggccataagttttacagctctagttttgaatgaattgatcatggtaggtctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 aaatggtggccataagttttacagctctagttttgaatgaattgatcatggtaggtctag 1823
Query: 241 agattaatacatggaacaagataatggctataacagaagtcgtgacactcttgatttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 agattaatacatggaacaagataatggctataacagaagtcgtgacactcttgatttatc 1883
Query: 301 taggctccatccctttccttggtgagtattttgacttatcctatgtttccacgactaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 taggctccatccctttccttggtgagtattttgacttatcctatgtttccacgactaaat 1943
Query: 361 ttcctctaagggttttggtcatattggtgatctcagtggtaccagtttgggccgcaaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 ttcctctaagggttttggtcatattggtgatctcagtggtaccagtttgggccgcaaaga 2003
Query: 421 gcatatatagacgcctaaatcctccaaactacgcaaaagttcaacagttttcgatggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2004 gcatatatagacgcctaaatcctccaaactacgcaaaagttcaacagttttcgatggttt 2063
Query: 481 gaaatattgaratatgtaaactggatactttatagatttgtgtagtaatgactgaraaca 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2064 gaaatattgaaatatgtaaactggatactttatagatttgtgtagtaatgactgaaaaca 2123
Query: 541 atatatttctatatatrakagtactgataatcccatattgtggctaatagataaaacact 600
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2124 atatatttctatatataatagtactgataatcccatattgtggctaatagataaaacact 2183
Query: 601 gaaaacccgtataaaagtgtatgcatattaaacaccaaagcgattacttagtattttggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2184 gaaaacccgtataaaagtgtatgcatattaaacaccaaagcgattacttagtattttggg 2243
Query: 661 tttaatacctatatgaaaagaagaacttatatatcatcctctgtgattagaaatttgtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2244 tttaatacctatatgaaaagaagaacttatatatcatcctctgtgattagaaatttgtat 2303
Query: 721 ttcttctttgttaccaaaacatcacttaatgcatcatcgtcaacaaaccatgcaacacgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2304 ttcttctttgttaccaaaacatcacttaatgcatcatcgtcaacaaaccatgcaacacgc 2363
Query: 781 ccggctgccccttcattgacaatactacttgkgaagacctttttctggtctttccattat 840
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2364 ccggctgccccttcattgacaatactacttg-gaagacctttttctggtctttccattat 2422
Query: 841 tgtcttgatgacaggagcctttgtagcaccttccacaacgaatgtaacttgatgtgaatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2423 tgtcttgatgacaggagcctttgtagcaccttccacaacgaatgtaacttgatgtgaatg 2482
Query: 901 acaaa 905
|||||
Sbjct: 2483 acaaa 2487
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6914
Number of Sequences: 1807
Number of extensions: 6914
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)